STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2YKI3_CIOSAUncharacterized protein. (379 aa)    
Predicted Functional Partners:
H2YAM8_CIOSA
Uncharacterized protein.
    
  0.862
H2ZL15_CIOSA
Uncharacterized protein.
    
  0.862
H2ZGL1_CIOSA
Uncharacterized protein.
    
 0.858
H2YXU4_CIOSA
Uncharacterized protein.
    
 0.763
H2Z2H0_CIOSA
Uncharacterized protein.
     
 0.738
H2YZW6_CIOSA
Bromo domain-containing protein.
   
 0.734
H2YZW9_CIOSA
Uncharacterized protein.
   
 0.734
H2ZC27_CIOSA
KIX domain-containing protein.
   
 0.726
H2YQB6_CIOSA
E3 ubiquitin-protein ligase.
    
 0.724
H2YZS5_CIOSA
Uncharacterized protein.
    
 0.696
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.