STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZG54_CIOSABAF250_C domain-containing protein. (204 aa)    
Predicted Functional Partners:
H2YVT2_CIOSA
Uncharacterized protein.
   
 0.978
H2Z1E7_CIOSA
Uncharacterized protein.
   
 0.971
H2ZJ49_CIOSA
HMG box domain-containing protein.
    
 0.969
H2Z2A5_CIOSA
Uncharacterized protein.
    
 0.955
H2YRX5_CIOSA
Uncharacterized protein.
    
 0.910
H2ZB17_CIOSA
Uncharacterized protein.
    
 0.892
H2ZB18_CIOSA
Uncharacterized protein.
    
 0.892
H2ZBJ0_CIOSA
Uncharacterized protein.
    
 0.862
H2Z2E7_CIOSA
Uncharacterized protein.
    
 0.817
H2ZG59_CIOSA
Uncharacterized protein.
 
  
  0.815
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.