node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplI | rplM | RIEPE_0260 | RIEPE_0026 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplI | rplS | RIEPE_0260 | RIEPE_0050 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.999 |
rplI | rplT | RIEPE_0260 | RIEPE_0097 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.999 |
rplI | rpmA | RIEPE_0260 | RIEPE_0282 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family. | 0.999 |
rplI | rpsF | RIEPE_0260 | RIEPE_0258 | Ribosomal protein L9; Binds to the 23S rRNA. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
rplI | rpsI | RIEPE_0260 | RIEPE_0027 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
rplI | rpsO | RIEPE_0260 | RIEPE_0266 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
rplI | rpsP | RIEPE_0260 | RIEPE_0052 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family. | 0.999 |
rplI | rpsR | RIEPE_0260 | RIEPE_0259 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.999 |
rplI | tuf | RIEPE_0260 | RIEPE_0412 | Ribosomal protein L9; Binds to the 23S rRNA. | Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.999 |
rplM | rplI | RIEPE_0026 | RIEPE_0260 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L9; Binds to the 23S rRNA. | 0.999 |
rplM | rplS | RIEPE_0026 | RIEPE_0050 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.999 |
rplM | rplT | RIEPE_0026 | RIEPE_0097 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.999 |
rplM | rpmA | RIEPE_0026 | RIEPE_0282 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family. | 0.999 |
rplM | rpsF | RIEPE_0026 | RIEPE_0258 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
rplM | rpsI | RIEPE_0026 | RIEPE_0027 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
rplM | rpsO | RIEPE_0026 | RIEPE_0266 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
rplM | rpsP | RIEPE_0026 | RIEPE_0052 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family. | 0.999 |
rplM | rpsR | RIEPE_0026 | RIEPE_0259 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.999 |
rplM | tuf | RIEPE_0026 | RIEPE_0412 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.999 |