STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACR71728.1Protein phosphatase; Psort-B: Cytoplasmic, score:8.87; COG0631 Serine/threonine protein phosphatase; HMMPfam:IPR014045; HMMPanther:IPR015655; HMMSmart:IPR001932; K01090 protein phosphatase. (239 aa)    
Predicted Functional Partners:
ACR72935.1
Psort-B: CytoplasmicMembrane, score:9.49; COG0515 Serine/threonine protein kinase; HMMPfam:IPR000719; BlastProDom:IPR000719; HMMSmart:IPR001245; HMMSmart:IPR002290; ScanRegExp:IPR008271; superfamily:IPR011009; K08884 serine/threonine protein kinase, bacterial.
 
 
 0.996
ACR71729.1
Serine/threonine protein kinase, bacterial; Psort-B: CytoplasmicMembrane, score:9.49; COG2815 Uncharacterized protein conserved in bacteria; HMMPfam:IPR000719; HMMPfam:IPR005543; BlastProDom:IPR000719; HMMSmart:IPR001245; HMMSmart:IPR002290; HMMSmart:IPR005543; ScanRegExp:IPR000719; ScanRegExp:IPR008271; superfamily:IPR011009; K08884 serine/threonine protein kinase, bacterial.
 
 0.991
ACR71726.1
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
 
 0.979
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.953
rsgA
GTPase EngC; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
 
  
 0.871
rlmN
Hypothetical protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
  
  
 0.862
ACR71725.1
Hypothetical protein; Psort-B: CytoplasmicMembrane, score:9.99; COG2738 Predicted Zn-dependent protease; HMMPfam:IPR007395.
  
    0.822
priA
Primosomal protein N (replication factor Y) (superfamily II helicase); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
  
    0.816
def
Hypothetical protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
  
    0.753
murE
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
       0.728
Your Current Organism:
Eubacterium eligens
NCBI taxonomy Id: 515620
Other names: Eubacterium eligens ATCC 27750, [. eligens ATCC 27750, [Eubacterium] eligens ATCC 27750
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.