Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
bpr_I0437 | bpr_I0438 | bpr_I0437 | bpr_I0438 | Acyltransferase. | Glycosyl transferase GT2 family. | 0.687 |
bpr_I0437 | bpr_I0440 | bpr_I0437 | bpr_I0440 | Acyltransferase. | Hypothetical protein. | 0.562 |
bpr_I0437 | bpr_I0441 | bpr_I0437 | bpr_I0441 | Acyltransferase. | Hypothetical protein. | 0.534 |
bpr_I0437 | bpr_I0442 | bpr_I0437 | bpr_I0442 | Acyltransferase. | Glycosyl transferase GT4 family. | 0.546 |
bpr_I0437 | bpr_I0443 | bpr_I0437 | bpr_I0443 | Acyltransferase. | ABC transporter ATP-binding/permease protein. | 0.451 |
bpr_I0437 | bpr_I0444 | bpr_I0437 | bpr_I0444 | Acyltransferase. | Hypothetical protein. | 0.438 |
bpr_I0437 | bpr_I0445 | bpr_I0437 | bpr_I0445 | Acyltransferase. | Glycosyl transferase GT8 family. | 0.536 |
bpr_I0437 | bpr_I0447 | bpr_I0437 | bpr_I0447 | Acyltransferase. | Glycosyl transferase GT8 family. | 0.425 |
bpr_I0437 | est4B | bpr_I0437 | bpr_I0439 | Acyltransferase. | Polysaccharide deacetylase Est4B. | 0.588 |
bpr_I0438 | bpr_I0437 | bpr_I0438 | bpr_I0437 | Glycosyl transferase GT2 family. | Acyltransferase. | 0.687 |
bpr_I0438 | bpr_I0440 | bpr_I0438 | bpr_I0440 | Glycosyl transferase GT2 family. | Hypothetical protein. | 0.645 |
bpr_I0438 | bpr_I0441 | bpr_I0438 | bpr_I0441 | Glycosyl transferase GT2 family. | Hypothetical protein. | 0.635 |
bpr_I0438 | bpr_I0442 | bpr_I0438 | bpr_I0442 | Glycosyl transferase GT2 family. | Glycosyl transferase GT4 family. | 0.630 |
bpr_I0438 | bpr_I0443 | bpr_I0438 | bpr_I0443 | Glycosyl transferase GT2 family. | ABC transporter ATP-binding/permease protein. | 0.525 |
bpr_I0438 | bpr_I0444 | bpr_I0438 | bpr_I0444 | Glycosyl transferase GT2 family. | Hypothetical protein. | 0.494 |
bpr_I0438 | bpr_I0445 | bpr_I0438 | bpr_I0445 | Glycosyl transferase GT2 family. | Glycosyl transferase GT8 family. | 0.507 |
bpr_I0438 | est4B | bpr_I0438 | bpr_I0439 | Glycosyl transferase GT2 family. | Polysaccharide deacetylase Est4B. | 0.688 |
bpr_I0440 | bpr_I0437 | bpr_I0440 | bpr_I0437 | Hypothetical protein. | Acyltransferase. | 0.562 |
bpr_I0440 | bpr_I0438 | bpr_I0440 | bpr_I0438 | Hypothetical protein. | Glycosyl transferase GT2 family. | 0.645 |
bpr_I0440 | bpr_I0441 | bpr_I0440 | bpr_I0441 | Hypothetical protein. | Hypothetical protein. | 0.705 |
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