STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bpr_I0445Glycosyl transferase GT8 family. (315 aa)    
Predicted Functional Partners:
bpr_I0444
Hypothetical protein.
       0.762
bpr_I0443
ABC transporter ATP-binding/permease protein.
       0.739
bpr_I0442
Glycosyl transferase GT4 family.
  
    0.651
bpr_I0441
Hypothetical protein.
       0.633
bpr_I0440
Hypothetical protein.
       0.580
est4B
Polysaccharide deacetylase Est4B.
       0.574
bpr_I0447
Glycosyl transferase GT8 family.
 
    
0.573
bpr_I0437
Acyltransferase.
  
    0.536
bpr_I0446
Hypothetical protein.
       0.528
bpr_I0438
Glycosyl transferase GT2 family.
  
  
 0.507
Your Current Organism:
Butyrivibrio proteoclasticus
NCBI taxonomy Id: 515622
Other names: B. proteoclasticus B316, Butyrivibrio proteoclasticus B316, Butyrivibrio proteoclasticus str. B316, Butyrivibrio proteoclasticus strain B316
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