Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
bpr_I2129 | glnA1 | bpr_I2129 | bpr_I0122 | Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamine synthetase type III GlnA1. | 0.913 |
bpr_I2129 | glnA2 | bpr_I2129 | bpr_I2337 | Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamine synthetase type I GlnA2. | 0.937 |
bpr_I2129 | glnA3 | bpr_I2129 | bpr_I2610 | Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamine synthetase type III GlnA3. | 0.913 |
bpr_I2129 | gltA1 | bpr_I2129 | bpr_I0947 | Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | NADPH-dependent glutamate synthase GltA1. | 0.951 |
bpr_I2129 | gltA3 | bpr_I2129 | bpr_I1306 | Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | NADPH-dependent glutamate synthase GltA3. | 0.951 |
bpr_I2129 | gltB | bpr_I2129 | bpr_I0123 | Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate synthase large subunit GltB. | 0.999 |
bpr_I2129 | gltD | bpr_I2129 | bpr_I0124 | Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate synthase small subunit GltD. | 0.958 |
bpr_I2129 | proA | bpr_I2129 | bpr_I1324 | Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Gamma-glutamyl phosphate reductase ProA; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.837 |
glnA1 | bpr_I2129 | bpr_I0122 | bpr_I2129 | Glutamine synthetase type III GlnA1. | Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.913 |
glnA1 | glnA2 | bpr_I0122 | bpr_I2337 | Glutamine synthetase type III GlnA1. | Glutamine synthetase type I GlnA2. | 0.920 |
glnA1 | glnA3 | bpr_I0122 | bpr_I2610 | Glutamine synthetase type III GlnA1. | Glutamine synthetase type III GlnA3. | 0.903 |
glnA1 | gltA1 | bpr_I0122 | bpr_I0947 | Glutamine synthetase type III GlnA1. | NADPH-dependent glutamate synthase GltA1. | 0.910 |
glnA1 | gltA3 | bpr_I0122 | bpr_I1306 | Glutamine synthetase type III GlnA1. | NADPH-dependent glutamate synthase GltA3. | 0.910 |
glnA1 | gltB | bpr_I0122 | bpr_I0123 | Glutamine synthetase type III GlnA1. | Glutamate synthase large subunit GltB. | 0.986 |
glnA1 | gltD | bpr_I0122 | bpr_I0124 | Glutamine synthetase type III GlnA1. | Glutamate synthase small subunit GltD. | 0.951 |
glnA1 | proA | bpr_I0122 | bpr_I1324 | Glutamine synthetase type III GlnA1. | Gamma-glutamyl phosphate reductase ProA; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.800 |
glnA2 | bpr_I2129 | bpr_I2337 | bpr_I2129 | Glutamine synthetase type I GlnA2. | Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.937 |
glnA2 | glnA1 | bpr_I2337 | bpr_I0122 | Glutamine synthetase type I GlnA2. | Glutamine synthetase type III GlnA1. | 0.920 |
glnA2 | glnA3 | bpr_I2337 | bpr_I2610 | Glutamine synthetase type I GlnA2. | Glutamine synthetase type III GlnA3. | 0.920 |
glnA2 | gltA1 | bpr_I2337 | bpr_I0947 | Glutamine synthetase type I GlnA2. | NADPH-dependent glutamate synthase GltA1. | 0.926 |
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