Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
bpr_I0736 | cel5B | bpr_I0736 | bpr_I1499 | Carbohydrate binding protein. | Endo-1,4-beta-glucanase Cel5B. | 0.886 |
bpr_I0736 | cel5C | bpr_I0736 | bpr_I1710 | Carbohydrate binding protein. | Endo-1,4-beta-glucanase Cel5C. | 0.790 |
bpr_I0736 | cel9B | bpr_I0736 | bpr_I1593 | Carbohydrate binding protein. | Cellodextrinase Cel9B. | 0.452 |
bpr_I0736 | cel9C | bpr_I0736 | bpr_I1500 | Carbohydrate binding protein. | Endo-1,4-beta-glucanase Cel9C. | 0.794 |
bpr_I1518 | cel5A | bpr_I1518 | bpr_I0299 | Glycosyl transferase GT2 family. | Endo-1,4-beta-glucanase/xylanase Cel5A; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.917 |
bpr_I1518 | cel5B | bpr_I1518 | bpr_I1499 | Glycosyl transferase GT2 family. | Endo-1,4-beta-glucanase Cel5B. | 0.913 |
bpr_I1518 | cel5C | bpr_I1518 | bpr_I1710 | Glycosyl transferase GT2 family. | Endo-1,4-beta-glucanase Cel5C. | 0.923 |
bpr_I1518 | cel5D | bpr_I1518 | bpr_I0728 | Glycosyl transferase GT2 family. | Endo-1,4-beta-glucanase Cel5D; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.917 |
bpr_I1518 | cel9A | bpr_I1518 | bpr_I2796 | Glycosyl transferase GT2 family. | Endo-1,4-beta-glucanase Cel9A. | 0.904 |
bpr_I1518 | cel9B | bpr_I1518 | bpr_I1593 | Glycosyl transferase GT2 family. | Cellodextrinase Cel9B. | 0.902 |
bpr_I1518 | cel9C | bpr_I1518 | bpr_I1500 | Glycosyl transferase GT2 family. | Endo-1,4-beta-glucanase Cel9C. | 0.902 |
cbp94A | cbp94B | bpr_I2447 | bpr_III152 | Cellobiose phosphorylase Cbp94A. | Cellobiose phosphorylase Cbp94B. | 0.938 |
cbp94A | cel5A | bpr_I2447 | bpr_I0299 | Cellobiose phosphorylase Cbp94A. | Endo-1,4-beta-glucanase/xylanase Cel5A; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.943 |
cbp94A | cel5B | bpr_I2447 | bpr_I1499 | Cellobiose phosphorylase Cbp94A. | Endo-1,4-beta-glucanase Cel5B. | 0.954 |
cbp94A | cel5C | bpr_I2447 | bpr_I1710 | Cellobiose phosphorylase Cbp94A. | Endo-1,4-beta-glucanase Cel5C. | 0.939 |
cbp94A | cel5D | bpr_I2447 | bpr_I0728 | Cellobiose phosphorylase Cbp94A. | Endo-1,4-beta-glucanase Cel5D; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.940 |
cbp94A | cel9A | bpr_I2447 | bpr_I2796 | Cellobiose phosphorylase Cbp94A. | Endo-1,4-beta-glucanase Cel9A. | 0.944 |
cbp94A | cel9B | bpr_I2447 | bpr_I1593 | Cellobiose phosphorylase Cbp94A. | Cellodextrinase Cel9B. | 0.941 |
cbp94A | cel9C | bpr_I2447 | bpr_I1500 | Cellobiose phosphorylase Cbp94A. | Endo-1,4-beta-glucanase Cel9C. | 0.932 |
cbp94B | cbp94A | bpr_III152 | bpr_I2447 | Cellobiose phosphorylase Cbp94B. | Cellobiose phosphorylase Cbp94A. | 0.938 |
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