STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cel5BEndo-1,4-beta-glucanase Cel5B. (616 aa)    
Predicted Functional Partners:
cel5A
Endo-1,4-beta-glucanase/xylanase Cel5A; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.976
cel9C
Endo-1,4-beta-glucanase Cel9C.
 
 
0.974
cel5D
Endo-1,4-beta-glucanase Cel5D; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.973
cel9B
Cellodextrinase Cel9B.
 
 
 0.972
cel9A
Endo-1,4-beta-glucanase Cel9A.
 
 
 0.962
cel5C
Endo-1,4-beta-glucanase Cel5C.
 
 
0.956
cbp94A
Cellobiose phosphorylase Cbp94A.
 
  
 0.954
cbp94B
Cellobiose phosphorylase Cbp94B.
 
  
 0.940
bpr_I1518
Glycosyl transferase GT2 family.
    
 0.913
bpr_I0736
Carbohydrate binding protein.
 
   
 0.886
Your Current Organism:
Butyrivibrio proteoclasticus
NCBI taxonomy Id: 515622
Other names: B. proteoclasticus B316, Butyrivibrio proteoclasticus B316, Butyrivibrio proteoclasticus str. B316, Butyrivibrio proteoclasticus strain B316
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