STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_0277Mannan endo-1,4-beta-mannosidase; PFAM: glycoside hydrolase family 26; Carbohydrate binding family 6; KEGG: dth:DICTH_0009 mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 26 family. (469 aa)    
Predicted Functional Partners:
Dtur_0629
Mannan endo-1,4-beta-mannosidase; PFAM: glycoside hydrolase family 26; KEGG: dth:DICTH_0466 beta-mannanase; Belongs to the glycosyl hydrolase 26 family.
  
  
0.921
Dtur_1586
Cellulase; PFAM: glycoside hydrolase family 5; protein of unknown function DUF291; KEGG: dth:DICTH_1476 endoglucanase B; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 0.852
Dtur_0795
PFAM: PfkB domain protein; KEGG: dth:DICTH_0637 ribokinase:carbohydrate kinase, PfkB.
     
 0.800
Dtur_0097
KEGG: dth:DICTH_1802 beta-mannanase/endoglucanase A.
 
   
 0.787
Dtur_0243
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 11; Carbohydrate binding family 6; KEGG: dth:DICTH_1968 endo-1,4-beta-xylanase A; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
   
 0.781
Dtur_0431
PFAM: Pectate lyase/Amb allergen; Fibronectin type III domain protein; KEGG: bld:BLi04129 hypothetical protein.
  
   
 0.741
Dtur_0652
N-acylglucosamine 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man). Catalyzes epimerization but also isomerization for beta-1,4- and alpha-1,4-gluco-oligosaccharides. Can use cellobiose, lactose, cellotriose, maltose and maltotriose.
 
   
 0.740
Dtur_0430
PFAM: Pectate lyase/Amb allergen; KEGG: dth:DICTH_0315 pectate lyase, polysaccharide lyase family 1.
  
   
 0.703
Dtur_1647
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: dth:DICTH_1538 glycosyl hydrolase family 10.
  
   
 0.694
Dtur_0435
PFAM: Pectate lyase/Amb allergen; KEGG: dth:DICTH_0315 pectate lyase, polysaccharide lyase family 1.
  
   
 0.689
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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