STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_0557Protein serine/threonine phosphatase; PFAM: Stage II sporulation E family protein; KEGG: dth:DICTH_0409 serine phosphatase. (379 aa)    
Predicted Functional Partners:
Dtur_0911
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: CBS domain containing protein; ATP-binding region ATPase domain protein; KEGG: dth:DICTH_0761 anti-sigma regulatory factor.
 
 
 0.976
Dtur_0556
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: dth:DICTH_0408 ferredoxin 2.
 
     0.956
ThiH
TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; KEGG: dth:DICTH_1550 thiazole biosynthesis protein ThiH.
  
  
 0.927
Dtur_0560
TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; hydrogenase large subunit domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: dth:DICTH_0412 periplasmic [Fe] hydrogenase 1.
 
    0.863
Dtur_0559
NADH dehydrogenase (quinone); PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: dth:DICTH_0411 Fe-hydrogenase beta subunit.
 
     0.817
Dtur_0912
Fe-S cluster domain protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: dth:DICTH_0762 ferredoxin 2.
 
     0.780
Dtur_0558
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: dth:DICTH_0410 NADH-ubiquinone oxidoreductase 24 kda subunit.
       0.748
rex
CoA-binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
     
 0.732
Dtur_0918
KEGG: dth:DICTH_0768 NADP-reducing hydrogenase, subunit B.
 
     0.645
Dtur_0914
KEGG: dth:DICTH_0764 DRTGG domain, putative.
  
     0.607
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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