STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_0765KEGG: dth:DICTH_0602 hypothetical protein. (329 aa)    
Predicted Functional Partners:
Dtur_0766
PFAM: protein of unknown function DUF107; KEGG: dth:DICTH_0603 YqeZ.
 
  
 0.987
Dtur_0764
KEGG: hypothetical protein.
       0.773
Dtur_0767
KEGG: dth:DICTH_0604 hypothetical protein.
       0.773
Dtur_0768
PFAM: ABC transporter related; ABC transporter, conserved site; SMART: AAA ATPase; KEGG: dth:DICTH_0605 ABC transporter ATP-binding protein.
       0.658
Dtur_0769
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0606 ABC transporter permease protein.
       0.616
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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