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rlmN protein (Dictyoglomus turgidum) - STRING interaction network
"rlmN" - Probable dual-specificity RNA methyltransferase RlmN in Dictyoglomus turgidum
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query proteins and first shell of interactors
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
rlmNProbable dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family (348 aa)    
Predicted Functional Partners:
Dtur_1437
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA (430 aa)
   
   
  0.949
Dtur_1435
PFAM- PASTA domain containing protein; KEGG- dth-DICTH_1330 eukaryotic-type protain kinase, putative (187 aa)
         
  0.875
Dtur_1434
PFAM- ribulose-phosphate 3-epimerase; KEGG- dth-DICTH_1329 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family (220 aa)
   
        0.872
Dtur_1438
PFAM- peptidase membrane zinc metallopeptidase putative; KEGG- dth-DICTH_1333 hypothetical protein (229 aa)
              0.869
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (153 aa)
   
        0.849
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus (314 aa)
   
        0.848
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP (210 aa)
   
        0.846
Dtur_1433
KEGG- dth-DICTH_1327 hypothetical protein (195 aa)
              0.845
Dtur_1444
UPF0296 protein Dtur_1444; PFAM- protein of unknown function DUF370; KEGG- dth-DICTH_1339 hypothetical protein; Belongs to the UPF0296 family (85 aa)
              0.842
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (67 aa)
              0.842
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum DSM6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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