STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_1746PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dth:DICTH_1635 2-hydroxyglutaryl-CoA dehydratase, D-component subfamily. (408 aa)    
Predicted Functional Partners:
Dtur_1745
TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: dth:DICTH_1634 (R)-2-hydroxyglutaryl-CoA dehydratase activator.
 
 0.987
Dtur_1747
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dth:DICTH_1636 2-hydroxyglutaryl-CoA dehydratase, D-component subfamily.
 
     0.946
araB
TIGRFAM: L-ribulokinase; PFAM: carbohydrate kinase FGGY; KEGG: dth:DICTH_1637 L-ribulokinase.
       0.705
Dtur_1749
PFAM: glycoside hydrolase family 4; KEGG: dth:DICTH_1638 alpha-glucosidase.
       0.525
Dtur_1750
PFAM: Auxin Efflux Carrier; KEGG: dth:DICTH_1639 transporter, auxin efflux carrier (AEC) family.
       0.486
Dtur_0777
PFAM: Rubrerythrin; KEGG: dth:DICTH_0615 rubrerythrin subfamily.
  
     0.451
Dtur_0305
PFAM: ferredoxin-dependent glutamate synthase; KEGG: dth:DICTH_0034 glutamate synthase domain protein.
  
     0.409
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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