STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Dtur_1768Putative transcriptional regulator, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. (135 aa)    
Predicted Functional Partners:
Dtur_1767
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: dth:DICTH_1657 CbiM.
     
 0.576
Dtur_1766
KEGG: dth:DICTH_1656 cobalamin biosynthesis protein.
     
 0.564
Dtur_1765
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: dth:DICTH_1655 cobalt transport protein, putative.
     
 0.557
Dtur_1764
PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: dth:DICTH_1654 ABC transporter, ATP-binding protein.
     
 0.553
Dtur_1769
PP-loop domain protein; PFAM: thiamine biosynthesis protein; ExsB family protein; PP-loop domain protein; KEGG: dth:DICTH_1659 hypothetical protein.
       0.551
Dtur_1763
PFAM: major facilitator superfamily MFS_1; KEGG: dth:DICTH_1653 hypothetical protein.
       0.511
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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