STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PODANS_1_15240Bifunctional lycopene cyclase/phytoene synthase; Bifunctional enzyme that catalyzes the reactions from geranylgeranyl diphosphate to phytoene (phytoene synthase) and lycopene to beta-carotene via the intermediate gamma-carotene (lycopene cyclase). (593 aa)    
Predicted Functional Partners:
PODANS_1_15010
Phytoene desaturase gene involved in carotenoid biosynthesis encoded by the PaAl1.
 
 0.998
PODANS_5_9670
Podospora anserina S mat+ genomic DNA chromosome 5, supercontig 9; Belongs to the FPP/GGPP synthase family.
  
 0.943
PODANS_2_10620
Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2; Belongs to the FPP/GGPP synthase family.
  
 0.939
PODANS_2_610
Podospora anserina S mat+ genomic DNA chromosome 2, supercontig 2; Belongs to the FPP/GGPP synthase family.
  
 0.937
PODANS_4_280
Podospora anserina S mat+ genomic DNA chromosome 4, supercontig 1.
     
 0.919
A0A090CQA4
Putative 3-keto-steroid reductase.
   
 
 0.893
PODANS_1_4850
3-hydroxy-3-methylglutaryl coenzyme A reductase.
  
 
 0.887
PODANS_6_5940
Podospora anserina S mat+ genomic DNA chromosome 6, supercontig 2.
   
 
 0.870
A0A090CQZ3
Putative Ergosterol biosynthetic protein 28.
   
 
 0.851
A0A090CJM1
Putative farnesyltransferase/geranylgeranyltransferase type-1.
     
 0.841
Your Current Organism:
Podospora anserina
NCBI taxonomy Id: 515849
Other names: P. anserina S mat+, Podospora anserina FGSC #10383, Podospora anserina S mat+
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