STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT78692.1Uncharacterized protein involved in response to NO. (402 aa)    
Predicted Functional Partners:
SIT78698.1
NosR/NirI family transcriptional regulator, nitrite reductase regulator.
 
    0.841
SIT78679.1
Nitric oxide reductase, NorB subunit apoprotein; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.727
SIT78685.1
Nitric oxide reductase, NorC subunit apoprotein.
 
    0.695
SIT78666.1
Nitric oxide reductase NorD protein.
 
    0.693
SIT78706.1
Dissimilatory nitrite reductase (NO-forming), cytochrome cd1 type apoprotein.
 
     0.624
SIT78755.1
Cytochrome C oxidase, cbb3-type, subunit III.
 
  
 0.563
SIT78662.1
Nitric oxide reductase NorE protein.
 
    0.542
SIT78673.1
Nitric oxide reductase NorQ protein.
  
    0.508
SIT78719.1
Cytochrome c55X.
 
    0.507
SIT78724.1
Protein NirF.
 
    0.491
Your Current Organism:
Pontibaca methylaminivorans
NCBI taxonomy Id: 515897
Other names: DSM 21219, KCTC 22497, P. methylaminivorans, Pontibaca methylaminivorans Kim et al. 2010, alpha proteobacterium GRP21, alpha proteobacterium PH34, strain GRP21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.