Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ctha_1127 | Ctha_1128 | Ctha_1127 | Ctha_1128 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Ctha_1127 | Ctha_1130 | Ctha_1127 | Ctha_1130 | Hypothetical protein. | PFAM: Prephenate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: cte:CT0084 prephenate dehydrogenase. | 0.417 |
Ctha_1127 | nadK | Ctha_1127 | Ctha_1131 | Hypothetical protein. | ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.417 |
Ctha_1127 | pyrE | Ctha_1127 | Ctha_1129 | Hypothetical protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.441 |
Ctha_1128 | Ctha_1127 | Ctha_1128 | Ctha_1127 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Ctha_1128 | Ctha_1130 | Ctha_1128 | Ctha_1130 | Hypothetical protein. | PFAM: Prephenate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: cte:CT0084 prephenate dehydrogenase. | 0.417 |
Ctha_1128 | nadK | Ctha_1128 | Ctha_1131 | Hypothetical protein. | ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.417 |
Ctha_1128 | pyrE | Ctha_1128 | Ctha_1129 | Hypothetical protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.441 |
Ctha_1130 | Ctha_1127 | Ctha_1130 | Ctha_1127 | PFAM: Prephenate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: cte:CT0084 prephenate dehydrogenase. | Hypothetical protein. | 0.417 |
Ctha_1130 | Ctha_1128 | Ctha_1130 | Ctha_1128 | PFAM: Prephenate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: cte:CT0084 prephenate dehydrogenase. | Hypothetical protein. | 0.417 |
Ctha_1130 | Ctha_1132 | Ctha_1130 | Ctha_1132 | PFAM: Prephenate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: cte:CT0084 prephenate dehydrogenase. | Hypothetical protein. | 0.418 |
Ctha_1130 | nadK | Ctha_1130 | Ctha_1131 | PFAM: Prephenate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: cte:CT0084 prephenate dehydrogenase. | ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.798 |
Ctha_1130 | pyrE | Ctha_1130 | Ctha_1129 | PFAM: Prephenate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: cte:CT0084 prephenate dehydrogenase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.749 |
Ctha_1132 | Ctha_1130 | Ctha_1132 | Ctha_1130 | Hypothetical protein. | PFAM: Prephenate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: cte:CT0084 prephenate dehydrogenase. | 0.418 |
Ctha_1132 | nadK | Ctha_1132 | Ctha_1131 | Hypothetical protein. | ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.418 |
Ctha_2684 | nadD | Ctha_2684 | Ctha_1225 | PFAM: Silent information regulator protein Sir2; KEGG: gfo:GFO_1094 NAD-dependent deacetylase. | Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.928 |
Ctha_2684 | nadE | Ctha_2684 | Ctha_1765 | PFAM: Silent information regulator protein Sir2; KEGG: gfo:GFO_1094 NAD-dependent deacetylase. | NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.924 |
Ctha_2684 | nadK | Ctha_2684 | Ctha_1131 | PFAM: Silent information regulator protein Sir2; KEGG: gfo:GFO_1094 NAD-dependent deacetylase. | ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.919 |
dxs | nadK | Ctha_0174 | Ctha_1131 | Deoxyxylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.618 |
ffh | nadK | Ctha_2465 | Ctha_1131 | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.483 |
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