Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Rmar_1532 | Rmar_1533 | Rmar_1532 | Rmar_1533 | KEGG: mlo:mll6613 hypothetical protein. | KEGG: pol:Bpro_1176 isoprenylcysteine carboxyl methyltransferase. | 0.584 |
| Rmar_1533 | Rmar_1532 | Rmar_1533 | Rmar_1532 | KEGG: pol:Bpro_1176 isoprenylcysteine carboxyl methyltransferase. | KEGG: mlo:mll6613 hypothetical protein. | 0.584 |
| Rmar_1533 | Rmar_2454 | Rmar_1533 | Rmar_2454 | KEGG: pol:Bpro_1176 isoprenylcysteine carboxyl methyltransferase. | TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium- translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: sat:SYN_01290 copper-exporting ATPase. | 0.439 |
| Rmar_1533 | rpsM | Rmar_1533 | Rmar_0866 | KEGG: pol:Bpro_1176 isoprenylcysteine carboxyl methyltransferase. | Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.476 |
| Rmar_2454 | Rmar_1533 | Rmar_2454 | Rmar_1533 | TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium- translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: sat:SYN_01290 copper-exporting ATPase. | KEGG: pol:Bpro_1176 isoprenylcysteine carboxyl methyltransferase. | 0.439 |
| rpsM | Rmar_1533 | Rmar_0866 | Rmar_1533 | Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | KEGG: pol:Bpro_1176 isoprenylcysteine carboxyl methyltransferase. | 0.476 |