STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR39325.1Predicted NAD/FAD-binding protein. (426 aa)    
Predicted Functional Partners:
SFR39340.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
 0.996
SFR39332.1
Hypothetical protein.
  
 0.970
SFR39365.1
Protein of unknown function.
 
   
 0.957
SFR58757.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
 0.949
SFR39308.1
SnoaL-like domain-containing protein.
 
   
 0.946
SFR39316.1
Short-chain dehydrogenase.
 
   
 0.914
SFR39357.1
Chalcone isomerase-like.
 
     0.905
SFR53687.1
Cytochrome c oxidase assembly protein subunit 11.
 
      0.844
SFR39301.1
Deoxyribodipyrimidine photo-lyase type I.
 
     0.834
SFR39268.1
anti-ECFsigma factor, ChrR.
 
  
 0.825
Your Current Organism:
Idiomarina maritima
NCBI taxonomy Id: 519453
Other names: CGMCC 1.7285, I. maritima, Idiomarina maritima (Wu et al. 2009) Taborda et al. 2010, JCM 15534, Pseudidiomarina maritima, Pseudidiomarina maritima Wu et al. 2009, Pseudidiomarina sp. 908087, strain 908087
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.