STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR54239.1Uncharacterized iron-regulated membrane protein. (327 aa)    
Predicted Functional Partners:
SFR54248.1
Iron complex outermembrane recepter protein.
 
     0.948
SFR54228.1
Prephenate dehydratase.
       0.613
SFR51708.1
Virginiamycin B lyase.
  
     0.556
SFR38946.1
Hypothetical protein.
  
    0.523
SFR37747.1
Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.504
SFR49123.1
Hemoglobin/transferrin/lactoferrin receptor protein.
 
     0.465
SFR57748.1
Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family.
  
     0.448
SFR53790.1
Protein of unknown function.
  
     0.420
SFR50058.1
Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid.
 
  
 0.418
SFR54260.1
Na+/H+ antiporter NhaC.
       0.417
Your Current Organism:
Idiomarina maritima
NCBI taxonomy Id: 519453
Other names: CGMCC 1.7285, I. maritima, Idiomarina maritima (Wu et al. 2009) Taborda et al. 2010, JCM 15534, Pseudidiomarina maritima, Pseudidiomarina maritima Wu et al. 2009, Pseudidiomarina sp. 908087, strain 908087
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.