STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT36017.1ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (404 aa)    
Predicted Functional Partners:
livF
Amino acid ABC transporter ATPase.
 
 0.999
AKT36016.1
ABC transporter.
 
 0.999
AKT36286.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
eutJ
Ethanolamine utilization protein EutJ.
 
 
 0.995
AKT41420.1
Uncharacterized protein.
 
  
 0.842
AKT41885.1
Uncharacterized protein.
 
  
 0.836
AKT37625.1
Uncharacterized protein.
  
  
 0.794
AKT36018.1
Uncharacterized protein.
       0.646
secF
Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
   
    0.537
capK
Capsule biosynthesis protein CapK.
  
    0.507
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.