Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKT36115.1 | AKT36116.1 | CMC5_002280 | CMC5_002290 | Uncharacterized protein. | Uncharacterized protein. | 0.509 |
| AKT36115.1 | AKT36117.1 | CMC5_002280 | CMC5_002300 | Uncharacterized protein. | Uncharacterized protein. | 0.421 |
| AKT36116.1 | AKT36115.1 | CMC5_002290 | CMC5_002280 | Uncharacterized protein. | Uncharacterized protein. | 0.509 |
| AKT36116.1 | AKT36117.1 | CMC5_002290 | CMC5_002300 | Uncharacterized protein. | Uncharacterized protein. | 0.623 |
| AKT36116.1 | AKT36118.1 | CMC5_002290 | CMC5_002310 | Uncharacterized protein. | Uncharacterized protein. | 0.446 |
| AKT36116.1 | AKT38172.1 | CMC5_002290 | CMC5_023150 | Uncharacterized protein. | Uncharacterized protein. | 0.409 |
| AKT36116.1 | AKT38316.1 | CMC5_002290 | CMC5_024610 | Uncharacterized protein. | Uncharacterized protein. | 0.455 |
| AKT36116.1 | mutM | CMC5_002290 | CMC5_002320 | Uncharacterized protein. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.431 |
| AKT36116.1 | nfi | CMC5_002290 | CMC5_053610 | Uncharacterized protein. | Endonuclease V. | 0.430 |
| AKT36117.1 | AKT36115.1 | CMC5_002300 | CMC5_002280 | Uncharacterized protein. | Uncharacterized protein. | 0.421 |
| AKT36117.1 | AKT36116.1 | CMC5_002300 | CMC5_002290 | Uncharacterized protein. | Uncharacterized protein. | 0.623 |
| AKT36117.1 | AKT36118.1 | CMC5_002300 | CMC5_002310 | Uncharacterized protein. | Uncharacterized protein. | 0.542 |
| AKT36117.1 | mutM | CMC5_002300 | CMC5_002320 | Uncharacterized protein. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.516 |
| AKT36118.1 | AKT36116.1 | CMC5_002310 | CMC5_002290 | Uncharacterized protein. | Uncharacterized protein. | 0.446 |
| AKT36118.1 | AKT36117.1 | CMC5_002310 | CMC5_002300 | Uncharacterized protein. | Uncharacterized protein. | 0.542 |
| AKT36118.1 | mutM | CMC5_002310 | CMC5_002320 | Uncharacterized protein. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.732 |
| AKT38172.1 | AKT36116.1 | CMC5_023150 | CMC5_002290 | Uncharacterized protein. | Uncharacterized protein. | 0.409 |
| AKT38316.1 | AKT36116.1 | CMC5_024610 | CMC5_002290 | Uncharacterized protein. | Uncharacterized protein. | 0.455 |
| mutM | AKT36116.1 | CMC5_002320 | CMC5_002290 | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | Uncharacterized protein. | 0.431 |
| mutM | AKT36117.1 | CMC5_002320 | CMC5_002300 | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | Uncharacterized protein. | 0.516 |
page 1 of 2