STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT36311.1Thioredoxin reductase. (319 aa)    
Predicted Functional Partners:
selD
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
     
 0.913
trxA-2
Thioredoxin; Belongs to the thioredoxin family.
 
 
 0.911
metB
Cystathionine gamma-synthase.
   
 
 0.911
metB-2
Cystathionine gamma-synthase.
   
 
 0.911
AKT36310.1
Uncharacterized protein.
 
   
 0.812
trxA-3
Thioredoxin.
 
 
 0.808
AKT36309.1
Uncharacterized protein.
       0.773
katE
Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.757
AKT40101.1
NADPH:quinone oxidoreductase.
 
    
 0.714
AKT43342.1
Uncharacterized protein.
  
 
 0.661
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.