STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT36455.1Uncharacterized protein. (478 aa)    
Predicted Functional Partners:
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
       0.788
AKT43949.1
Uncharacterized protein.
  
     0.718
AKT42745.1
Uncharacterized protein.
  
     0.642
AKT43345.1
Uncharacterized protein.
  
     0.611
AKT42296.1
Uncharacterized protein.
  
     0.585
AKT36162.1
Uncharacterized protein.
  
     0.578
AKT43948.1
Uncharacterized protein.
  
     0.569
AKT39323.1
Phosphohydrolase.
  
     0.556
AKT36453.1
Acetyltransferase.
       0.553
AKT36452.1
Cyclic nucleotide-binding protein.
       0.549
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.