STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT36831.1Uncharacterized protein. (696 aa)    
Predicted Functional Partners:
pbp-3
Penicillin-binding protein.
 
     0.938
AKT36832.1
DNA helicase.
       0.762
AKT37935.1
Serine hydrolase.
 
     0.607
AKT43769.1
Uncharacterized protein.
  
     0.589
AKT43784.1
Serine hydrolase.
 
     0.527
AKT37656.1
Peptidase M28.
  
    0.501
AKT36833.1
Uncharacterized protein.
       0.492
AKT41685.1
Amidohydrolase.
 
     0.490
AKT41568.1
Serine hydrolase.
  
     0.475
AKT36947.1
Uncharacterized protein.
  
     0.460
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.