STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT36991.1ABC transporter permease. (275 aa)    
Predicted Functional Partners:
AKT36989.1
ABC transporter substrate-binding protein.
 
 0.998
AKT36990.1
ABC transporter permease.
 
 0.995
AKT36988.1
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.993
AKT36042.1
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.977
AKT36041.1
Sugar ABC transporter permease.
 
 
 0.972
AKT37511.1
ABC transporter permease.
 
 0.963
AKT37510.1
ABC transporter substrate-binding protein.
 
 
 0.930
AKT38433.1
Uncharacterized protein.
  
 
 0.810
dehII-3
Haloacid dehalogenase.
       0.752
AKT38398.1
Uncharacterized protein.
  
  
 0.446
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.