STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT37117.1Ammonia channel protein. (404 aa)    
Predicted Functional Partners:
AKT43354.1
Uncharacterized protein; Belongs to the P(II) protein family.
 
 0.999
AKT40762.1
Sensory hisitidine kinase.
      0.904
glnA
Glutamine synthetase.
  
  
 0.864
AKT43632.1
Glutamate synthase.
 
  
 0.828
AKT39779.1
Histidine kinase.
 
 
 0.790
modB
Molybdate ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
    0.769
AKT39071.1
Uncharacterized protein.
   
  
 0.701
acnA
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.672
AKT39019.1
Uncharacterized protein.
      0.650
ureB
Urease subunit beta; Belongs to the urease beta subunit family.
  
  
 0.590
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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