STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT37420.1Protein kinase. (1174 aa)    
Predicted Functional Partners:
AKT37421.1
Uncharacterized protein.
       0.762
AKT44056.1
Uncharacterized protein.
  
 0.701
AKT42555.1
Uncharacterized protein.
 
 0.653
AKT42912.1
Uncharacterized protein.
  
     0.653
AKT37081.1
Uncharacterized protein.
  
 0.642
AKT43477.1
Uncharacterized protein.
  
     0.594
AKT43485.1
Uncharacterized protein.
 
 
   0.574
AKT39461.1
Uncharacterized protein.
  
     0.564
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 0.519
AKT41669.1
Metallophosphatase.
 
     0.515
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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