STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT37638.1ABC transporter sodium permease. (708 aa)    
Predicted Functional Partners:
AKT37637.1
ABC transporter.
 
 
 0.987
AKT41962.1
Uncharacterized protein.
  
  
 0.899
AKT41312.1
Peptide synthetase.
  
 
 0.666
AKT38800.1
Uncharacterized protein.
  
  
 0.662
AKT39178.1
Uncharacterized protein.
  
  
 0.662
AKT39183.1
Uncharacterized protein.
  
  
 0.662
AKT39993.1
Uncharacterized protein.
  
  
 0.662
AKT42423.1
Uncharacterized protein.
  
  
 0.662
cyaA-2
Adenylate cyclase.
  
  
 0.662
AKT37640.1
Amino acid ABC transporter permease.
       0.635
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.