STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
isftu1-5Transposase. (430 aa)    
Predicted Functional Partners:
AKT38730.1
ATP-binding protein.
  
  
 0.688
AKT38130.1
Helicase.
 
    0.671
AKT42769.1
Fibronectin-binding protein.
  
  
 0.660
AKT43612.1
Fibronectin-binding protein.
  
  
 0.660
AKT40553.1
Serine/threonine protein kinase.
  
    0.622
AKT38719.1
Endonuclease DDE.
  
     0.607
AKT37840.1
Uncharacterized protein.
       0.550
AKT37841.1
Uncharacterized protein; Belongs to the sigma-70 factor family. ECF subfamily.
       0.550
isftu1-28
Transposase.
  
     0.503
isftu1-33
Transposase.
  
     0.502
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.