STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT38312.1Polysaccharide deacetylase. (310 aa)    
Predicted Functional Partners:
AKT38308.1
Family 2 glycosyl transferase.
 
  
 0.947
AKT38313.1
Uncharacterized protein.
 
     0.917
AKT38311.1
Peptidase M20.
 
     0.859
AKT38310.1
Carbamoyltransferase.
 
     0.849
AKT38309.1
Uncharacterized protein.
       0.784
AKT37779.1
O-antigen polymerase.
 
   
 0.736
celD
Cellulose biosynthesis protein CelD.
 
   
 0.714
AKT41903.1
FeS-binding protein.
  
     0.656
AKT39554.1
Uncharacterized protein.
 
     0.643
AKT38968.1
Uncharacterized protein.
  
     0.616
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.