STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39060.1Glycosyltransferase. (379 aa)    
Predicted Functional Partners:
AKT43254.1
Uncharacterized protein.
 
     0.793
AKT39066.1
NAD-dependent dehydratase.
 
    0.782
AKT38605.1
Uncharacterized protein.
  
     0.688
AKT42875.1
Uncharacterized protein.
  
     0.676
AKT38594.1
Uncharacterized protein.
  
     0.628
AKT38606.1
Metallophosphoesterase.
  
     0.556
AKT40319.1
Uncharacterized protein.
  
    0.542
AKT37652.1
Uncharacterized protein.
  
     0.527
AKT42899.1
Uncharacterized protein.
  
     0.522
AKT42116.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.488
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.