STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39068.1Nucleoside-diphosphate-sugar pyrophosphorylase. (236 aa)    
Predicted Functional Partners:
AKT40826.1
Kinase.
 
  
 0.875
selB
Selenocysteine-specific translation elongation factor.
    
 0.843
AKT39066.1
NAD-dependent dehydratase.
 
 
 0.832
rfbB
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.796
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
0.749
AKT44151.1
Nucleotidyltransferase.
 
     0.730
AKT40585.1
Epimerase.
 
 
 0.662
AKT37131.1
NDP-sugar oxidoreductase.
 
 
 0.659
galE-2
UDP-glucose 4-epimerase.
 
 
 0.611
galE-5
UDP-glucose 4-epimerase.
 
 
 0.562
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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