STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39295.1Uncharacterized protein. (799 aa)    
Predicted Functional Partners:
AKT42096.1
Glyoxalase.
  
     0.629
tatA
Protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
       0.557
AKT38185.1
Uncharacterized protein.
  
     0.512
AKT41768.1
Uncharacterized protein.
  
     0.503
AKT39438.1
TonB-dependent receptor.
  
     0.483
AKT38189.1
Uncharacterized protein.
  
     0.470
AKT35940.1
Uncharacterized protein.
  
     0.427
AKT42414.1
Outer membrane efflux protein.
  
     0.423
AKT37436.1
Uncharacterized protein.
  
     0.408
AKT37413.1
Peptide transporter.
  
     0.401
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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