STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
marRMarR family transcriptional regulator. (203 aa)    
Predicted Functional Partners:
AKT39357.1
Endoribonuclease L-PSP.
 
     0.892
paaG-9
enoyl-CoA hydratase.
 
  
 0.859
fadE-7
acyl-CoA dehydrogenase.
 
  
 0.823
fabG
3-ketoacyl-ACP reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.822
AKT39353.1
NADH oxidase.
  
    0.790
AKT39352.1
Uncharacterized protein.
       0.773
AKT39514.1
salicylyl-CoA 5-hydroxylase.
 
  
 0.721
AKT37640.1
Amino acid ABC transporter permease.
  
  
 0.618
AKT39024.1
Uncharacterized protein.
  
     0.436
AKT39359.1
Uncharacterized protein.
       0.423
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.