STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39420.1Uncharacterized protein. (423 aa)    
Predicted Functional Partners:
AKT39418.1
Ligand-gated channel protein.
 
     0.947
hsdR
Type I deoxyribonuclease HsdR.
 
     0.899
AKT39701.1
Thiol oxidoreductase.
 
  
 0.713
AKT39700.1
Iron-regulated protein.
 
  
 0.648
AKT42813.1
Uncharacterized protein.
  
     0.639
AKT44205.1
Uncharacterized protein.
  
     0.634
AKT39620.1
Uncharacterized protein.
  
     0.609
AKT35940.1
Uncharacterized protein.
  
     0.603
AKT41963.1
Uncharacterized protein.
 
     0.594
AKT41376.1
tonB family protein.
  
     0.591
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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