STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39618.1Amidase; Belongs to the amidase family. (478 aa)    
Predicted Functional Partners:
glnS-2
glutaminyl-tRNA synthetase.
  
 
 0.993
gatB
aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
 
 0.965
capK-2
Capsule biosynthesis protein CapK.
  
 0.914
AKT42012.1
Aliphatic nitrilase.
  
 
 0.908
aldA-2
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.906
aldA-4
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.906
aldA-8
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.906
aldA-9
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.906
acyP
Acylphosphatase.
    
  0.905
AKT38426.1
4-hydroxybenzoate--CoA ligase.
   
 
  0.904
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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