STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
motAFlagellar motor protein MotA. (235 aa)    
Predicted Functional Partners:
exbD
Biopolymer transporter ExbD.
 
 
 0.975
exbD-2
Biopolymer transporter ExbD.
 
 
 0.974
tonB
Energy transducer protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.903
AKT41031.1
Uncharacterized protein.
 
 
 0.899
exbD-3
Biopolymer transporter ExbD.
 
 
 0.898
exbD-4
Biopolymer transporter ExbD.
 
 
 0.896
exbD-6
Biopolymer transporter ExbD.
 
 
 0.886
exbD-5
Biopolymer transporter ExbD.
 
 
 0.880
AKT43628.1
Uncharacterized protein.
 
 
 0.768
tonB-2
Biopolymer transporter TonB.
 
 
 0.743
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.