STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39747.1Uncharacterized protein. (558 aa)    
Predicted Functional Partners:
AKT39749.1
ABC transporter.
 
  
 0.958
AKT39748.1
ABC transporter permease.
  
 0.956
AKT41943.1
ABC transporter permease.
 
  
 0.825
AKT39843.1
Membrane protein.
 
  
 0.819
AKT39746.1
Uncharacterized protein.
       0.806
AKT39844.1
Multidrug ABC transporter ATPase.
 
  
 0.790
AKT41942.1
ABC transporter.
 
  
 0.785
AKT39842.1
ABC transporter.
  
     0.752
AKT39745.1
Uncharacterized protein.
       0.642
AKT36270.1
ABC transporter ATP-binding protein.
 
  
 0.566
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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