STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39792.1Uncharacterized protein. (112 aa)    
Predicted Functional Partners:
AKT42832.1
Uncharacterized protein.
  
     0.743
AKT39791.1
Carnitine dehydratase; Belongs to the CoA-transferase III family.
 
     0.730
AKT38590.1
Uncharacterized protein.
  
     0.729
AKT38601.1
Uncharacterized protein.
  
     0.728
AKT41842.1
Uncharacterized protein.
  
     0.728
AKT38091.1
Uncharacterized protein.
  
     0.725
AKT39196.1
Uncharacterized protein.
  
     0.715
AKT38156.1
Uncharacterized protein.
  
     0.708
AKT38093.1
Uncharacterized protein.
  
     0.707
AKT37062.1
Uncharacterized protein.
  
     0.699
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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