STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39856.1Fatty acid desaturase. (311 aa)    
Predicted Functional Partners:
AKT39857.1
Metallo-beta-lactamase.
 
     0.696
AKT35940.1
Uncharacterized protein.
  
     0.664
AKT39089.1
Uncharacterized protein.
  
     0.651
AKT39622.1
Uncharacterized protein.
  
     0.650
AKT39086.1
Uncharacterized protein.
  
     0.646
AKT40406.1
Uncharacterized protein.
  
     0.640
AKT39088.1
Uncharacterized protein.
  
     0.637
AKT39087.1
Uncharacterized protein.
  
     0.636
AKT41803.1
Uncharacterized protein.
  
     0.633
AKT39091.1
Uncharacterized protein.
  
     0.631
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.