STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39858.1Uncharacterized protein. (156 aa)    
Predicted Functional Partners:
katE
Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.742
csbD
General stress protein CsbD; Belongs to the UPF0337 (CsbD) family.
   
  
 0.606
csbD-2
General stress protein CsbD; Belongs to the UPF0337 (CsbD) family.
   
  
 0.606
ohr
Organic hydroperoxide resistance protein.
   
    0.576
AKT36060.1
Uncharacterized protein.
 
  
 0.517
AKT40711.1
Uncharacterized protein.
  
     0.498
AKT38070.1
Two-component hybrid sensor and regulator.
  
   
 0.470
rplY
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
   
  
 0.446
serC
MFS transporter; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
       0.439
AKT37074.1
Uncharacterized protein.
  
    0.435
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.