STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39913.1Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (285 aa)    
Predicted Functional Partners:
AKT41201.1
Oxidoreductase.
  
     0.621
AKT42230.1
Oxidoreductase.
  
     0.586
AKT38233.1
Short-chain dehydrogenase.
  
     0.583
AKT44056.1
Uncharacterized protein.
  
   0.552
AKT41319.1
Uncharacterized protein.
  
 
 0.541
AKT38231.1
3-oxoacyl-ACP reductase.
  
    0.497
AKT37116.1
Peptidase M35.
  
     0.480
AKT40215.1
Aspartate aminotransferase.
  
   0.460
AKT37178.1
Uncharacterized protein.
  
     0.459
AKT40110.1
Aldehyde-activating protein.
  
     0.446
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.