STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39932.1Gliding motility protein. (239 aa)    
Predicted Functional Partners:
AKT43385.1
Dynein regulation protein LC7.
 
 
 0.984
AKT40948.1
Uncharacterized protein.
  
 
 0.816
ftsY
Cell division protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.
   
 0.756
AKT41856.1
Uncharacterized protein.
  
 
 0.746
AKT36415.1
Uncharacterized protein.
  
 
   0.731
ffh
Signal recognition particle protein.
   
 
 0.666
AKT40829.1
Uncharacterized protein.
  
     0.656
pilM
Pilus assembly protein PilM.
  
   
 0.556
AKT36100.1
Uncharacterized protein.
  
     0.534
AKT42812.1
Uncharacterized protein.
  
     0.533
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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