STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT40026.1ABC transporter ATP-binding protein. (560 aa)    
Predicted Functional Partners:
cmdD
Uncharacterized protein; Involved in the synthesis of chondramides. Activates R-beta- tyrosine and probably phenylalanine.
 
  
 0.802
AKT40027.1
Peptide synthetase.
 
  
 0.799
mbtH
Antibiotic synthesis protein MbtH.
 
  
 0.747
AKT43458.1
Uncharacterized protein.
 
     0.741
AKT37645.1
Uncharacterized protein.
 
  
 0.727
AKT36703.1
Peptide synthetase.
 
  
 0.724
AKT43460.1
Uncharacterized protein.
 
     0.715
cndF
Amino acid adenylation domain-containing protein.
 
  
 0.695
AKT42975.1
Uncharacterized protein.
 
  
 0.691
AKT40025.1
ABC transporter ATP-binding protein.
 
    
0.688
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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