STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lnt-2Uncharacterized protein; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. (542 aa)    
Predicted Functional Partners:
AKT40483.1
Uncharacterized protein.
       0.776
AKT39814.1
Membrane protein.
 
   
 0.753
AKT38037.1
ABC transporter permease.
 
   
 0.632
AKT42338.1
Uncharacterized protein.
 
   
 0.593
comL
Competence protein ComL.
  
   
 0.585
AKT36614.1
Uncharacterized protein.
 
   
 0.582
AKT37393.1
Outer membrane protein.
 
   
 0.540
AKT40482.1
Histidine kinase.
       0.530
AKT38630.1
Uncharacterized protein.
 
   
 0.520
AKT40867.1
Uncharacterized protein.
  
     0.485
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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