STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT40553.1Serine/threonine protein kinase. (1127 aa)    
Predicted Functional Partners:
AKT40554.1
Uncharacterized protein.
  
  
 0.791
AKT43612.1
Fibronectin-binding protein.
 
    0.746
AKT42769.1
Fibronectin-binding protein.
 
    0.737
AKT38730.1
ATP-binding protein.
  
    0.675
AKT42916.1
DNA methyltransferase.
  
  
 0.652
isftu1-5
Transposase.
  
    0.622
isftu1-20
Transposase.
  
    0.622
AKT41629.1
Uncharacterized protein.
  
    0.622
AKT41630.1
Uncharacterized protein.
  
    0.622
AKT43758.1
Uncharacterized protein.
  
    0.622
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.