STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmhAPhosphoheptose isomerase. (205 aa)    
Predicted Functional Partners:
AKT40826.1
Kinase.
 
 0.998
AKT37343.1
Uncharacterized protein.
 
 0.992
AKT40828.1
Sugar phosphatase.
 
  
 0.990
AKT40825.1
Nucleotidyl transferase.
 
  
 0.830
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
    
 
 0.731
AKT43948.1
Uncharacterized protein.
 
   
 0.488
AKT40430.1
glycosyltransferase/SAM-binding domain-containing protein.
 
 
 
 0.450
AKT40824.1
Uncharacterized protein.
       0.444
galE-4
UDP-glucose 4-epimerase.
 
  
 0.430
AKT39832.1
Uncharacterized protein.
 
   
 0.409
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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