STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41010.1Fatty acid hydroxylase. (218 aa)    
Predicted Functional Partners:
croE
3-hydroxy-3-methylglutaryl-ACP synthase.
   
 
 0.614
AKT40762.1
Sensory hisitidine kinase.
   
    0.576
AKT40123.1
Uncharacterized protein.
 
     0.526
AKT41009.1
Uncharacterized protein.
       0.522
trpF
N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family.
   
   0.490
AKT37338.1
FAD-dependent oxidoreductase.
  
 
 0.486
AKT41012.1
feruloyl-CoA synthase.
     
 0.474
crtB
Phytoene synthase.
  
 
 0.462
AKT37454.1
Uncharacterized protein.
  
 
 0.462
AKT39199.1
Uncharacterized protein.
   
 
 0.454
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.