STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41051.1Fimbrial protein pilA. (196 aa)    
Predicted Functional Partners:
AKT41052.1
Fimbiral protein pilA.
 
  
0.962
AKT41053.1
Fimbiral protein pilA.
 
  
0.953
AKT44011.1
Uncharacterized protein.
 
  
 0.817
AKT39381.1
Uncharacterized protein.
 
  
 0.797
AKT37144.1
Uncharacterized protein.
  
  
 0.729
AKT39384.1
Uncharacterized protein.
  
  
 0.729
pilQ
Pilus assembly protein PilQ.
 
   
 0.727
AKT37145.1
Uncharacterized protein.
  
  
 0.713
AKT39383.1
Uncharacterized protein.
  
  
 0.713
AKT38382.1
Uncharacterized protein.
 
   
 0.683
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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