STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41126.1Spore coat protein H. (408 aa)    
Predicted Functional Partners:
AKT41127.1
VTC domain-containing protein.
 
     0.883
AKT41122.1
Uncharacterized protein.
 
     0.846
AKT41124.1
Uncharacterized protein.
       0.782
AKT41125.1
Uncharacterized protein.
       0.777
AKT41121.1
Uncharacterized protein.
 
    
0.559
AKT40267.1
Uncharacterized protein.
  
     0.546
AKT39860.1
Uncharacterized protein.
  
     0.492
AKT37979.1
Uncharacterized protein.
  
     0.491
AKT36073.1
Uncharacterized protein.
  
     0.486
AKT40568.1
Uncharacterized protein.
  
     0.462
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.